dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04767
Location and strand information: 5064237 - 5065127 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04768
Location and strand information: 5065120 - 5066022 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04769
Location and strand information: 5066035 - 5067162 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Trehalose import ATP-binding protein SugC

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04770
Location and strand information: 5067179 - 5068465 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04771
Location and strand information: 5068536 - 5069663 (+)
Family: PL22_1|PL22
Protein type: CAZyme
Protein description: Oligogalacturonate lyase
Protein isoelectric point: 6.2799
Protein molecular weight: 43217.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04772
Location and strand information: 5069876 - 5071222 (-)
Family: 1.B.15.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04773
Location and strand information: 5071345 - 5072778 (-)
Family: GH32
Protein type: CAZyme
Protein description: Sucrose-6-phosphate hydrolase
Protein isoelectric point: 5.0442
Protein molecular weight: 54532.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04774
Location and strand information: 5072797 - 5074038 (-)
Family: 2.A.1.5.2
Protein type: TC
Protein description: Sucrose permease

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04775
Location and strand information: 5074279 - 5075274 (+)
Family: LacI
Protein type: TF
Protein description: Catabolite control protein A

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04776
Location and strand information: 5075275 - 5076693 (-)
Family: 2.A.1.1.2
Protein type: TC
Protein description: Arabinose-proton symporter

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04777
Location and strand information: 5077005 - 5077766 (-)
Family: null
Protein type: null
Protein description: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04778
Location and strand information: 5078309 - 5079484 (+)
Family: PL22_1|PL22
Protein type: CAZyme
Protein description: Oligogalacturonate lyase
Protein isoelectric point: 5.239
Protein molecular weight: 44159.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04779
Location and strand information: 5079701 - 5080396 (-)
Family: 1.B.35.1.7
Protein type: TC
Protein description: Oligogalacturonate-specific porin KdgM

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04780
Location and strand information: 5080639 - 5081817 (-)
Family: null
Protein type: null
Protein description: Acetyl-CoA acetyltransferase

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04781
Location and strand information: 5081948 - 5082820 (-)
Family: HTH_1
Protein type: TF
Protein description: HTH-type transcriptional regulator ArgP

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04782
Location and strand information: 5082917 - 5083378 (+)
Family: 2.A.117.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002351_1|CGC72
Gene ID: MGYG000002351_04783
Location and strand information: 5083515 - 5084744 (+)
Family: 2.A.42.2.5
Protein type: TC
Protein description: Inner membrane transport protein YqeG

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002351_04771	PL22_e0\|4.2.2.6	pectin
MGYG000002351_04773	GH32_e63\|3.2.1.26	fructan
MGYG000002351_04778	PL22_e0\|4.2.2.6	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002351_04767	Lactose transport system permease protein LacF	TC	5064237	5065127	+	3.A.1.1.11
MGYG000002351_04768	L-arabinose transport system permease protein AraQ	TC	5065120	5066022	+	3.A.1.1.11
MGYG000002351_04769	Trehalose import ATP-binding protein SugC	TC	5066035	5067162	+	3.A.1.1.11
MGYG000002351_04770	Putative ABC transporter substrate-binding protein YesO	TC	5067179	5068465	+	3.A.1.1.11
MGYG000002351_04771	Oligogalacturonate lyase	CAZyme	5068536	5069663	+	PL22_1\| PL22
MGYG000002351_04772	hypothetical protein	TC	5069876	5071222	-	1.B.15.1.1
MGYG000002351_04773	Sucrose-6-phosphate hydrolase	CAZyme	5071345	5072778	-	GH32
MGYG000002351_04774	Sucrose permease	TC	5072797	5074038	-	2.A.1.5.2
MGYG000002351_04775	Catabolite control protein A	TF	5074279	5075274	+	LacI
MGYG000002351_04776	Arabinose-proton symporter	TC	5075275	5076693	-	2.A.1.1.2
MGYG000002351_04777	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase	null	5077005	5077766	-	adh_short_C2
MGYG000002351_04778	Oligogalacturonate lyase	CAZyme	5078309	5079484	+	PL22_1\| PL22
MGYG000002351_04779	Oligogalacturonate-specific porin KdgM	TC	5079701	5080396	-	1.B.35.1.7
MGYG000002351_04780	Acetyl-CoA acetyltransferase	null	5080639	5081817	-	Thiolase_N\| Thiolase_C
MGYG000002351_04781	HTH-type transcriptional regulator ArgP	TF	5081948	5082820	-	HTH_1
MGYG000002351_04782	hypothetical protein	TC	5082917	5083378	+	2.A.117.1.3
MGYG000002351_04783	Inner membrane transport protein YqeG	TC	5083515	5084744	+	2.A.42.2.5
Protein ID	Protein Name	Type	Start	End	Strand	Signature